circRNA basic information
circBase ID: hsa_circ_0089153
Name: hsa_circ_NUP214
Synonym: -
Host Gene: NUP214
Genomic location(hg19): chr9:134011326-134022971:+
Genomic location(hg38): chr9:131135939-131147584:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009688
MONDO name: myasthenia gravis
Disease details: myasthenia gravis
Disease DO ID:
437
Disease MeSH ID:
D009157
Disease NCIt ID:
C60989
Disease ICD11 ID:
1270100227
Disease OMIM ID:
254200
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood mononuclear cells (PBMCs); blood samples

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: SMAD4
Associated microRNA: miR-145-5p , miR-7-5p
Biological function: Potential novel biomarker for AchR + MG; interrelated with the development of AchR + MG and identified as a hub circRNA with high degree in the DECM network.
Molecular mechanism: Included in circRNA-miRNA-mRNA ceRNA network analysis and associated with MG-related immune pathways through predicted/integrated miRNA-mRNA interactions; no direct experimental validation of a specific circNUP214 axis was reported in MG.
Biological pathway or process:

ceRNA regulation (other); immune regulation (other); MAPK (other); Wnt/beta-catenin (other)

Detected method:
Q
M
Validation methods:

RNase R Treatment; Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Potential novel biomarker for AchR + MG; diagnostic ROC AUC = 0.8288.

Description:

hsa_circ_0089153/circNUP214 is down-regulated in PBMCs from MG patients and was validated by RT-qPCR. It was identified as a hub circRNA in the ceRNA network and proposed as a potential diagnostic biomarker for AchR-positive MG, but its specific MG mechanism was not directly validated.

Confidence score:

0.6556

Other information
Title:

Construction of ceRNA network mediated by circRNAs screening from microarray and identification of novel biomarkers for myasthenia gravis.

Journal: Gene
Published: 2024
PubMed ID: 38631652
Study type:

combined biological and clinical study

Data availability: Data will be made available on request; Supplementary data to this article can be found online at https://doi. org/10.1016/j.gene.2024.148463.
Code availability: -