circRNA basic information
circBase ID: hsa_circ_0038718
Name: hsa_circ_IL4R
Synonym: circ_0038718
Host Gene: IL4R
Genomic location(hg19): chr16:27351506-27353580:+
Genomic location(hg38): chr16:27340185-27342259:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021063
MONDO name: malignant colon neoplasm
Disease details: colon cancer
Disease DO ID:
219
Disease MeSH ID:
-
Disease NCIt ID:
C9242
Disease ICD11 ID:
1265576634
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissue; matched adjacent tissue

Cell lines:

CCD-18Co; LoVo; HT-29; HCT116; SW480; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: Axin2
Associated microRNA: miR-195-5p
Biological function: Promotes colon cancer cell proliferation, migration and invasion; promotes tumor growth in vivo.
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-195-5p to modulate Axin2 and affect the Wnt/beta-catenin signaling pathway.
Biological pathway or process:

Wnt/beta-catenin (promotes); proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; MTT; Transwell Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation

Clinical significance:

-

Description:

circ_0038718 is up-regulated in colon/colorectal cancer and mainly localizes to the cytoplasm. It promotes malignant phenotypes (proliferation, migration, invasion and xenograft tumor growth) by sponging miR-195-5p to upregulate Axin2 and activate Wnt/beta-catenin signaling.

Confidence score:

0.8244

Other information
Title:

circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/beta-catenin signal pathway.

Journal: BMC genomics
Published: 2021
PubMed ID: 34706645
Study type:

combined biological and clinical study

Data availability: GSE126092; GSE126093; GSE126094; supplementary table-Raw Data
Code availability: -