circRNA basic information
circBase ID: -
Name: hsa_circ_AGTPBP1
Synonym: circ_000999
Host Gene: AGTPBP1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008903
MONDO name: lung cancer
Disease details: lung cancer
Disease DO ID:
1324
Disease MeSH ID:
-
Disease NCIt ID:
C7377
Disease ICD11 ID:
-
Disease OMIM ID:
211980
Species: Human
Species details: Homo sapiens
Tissue specimen:

human LC tissues; adjacent tissues; rat lung tissues; pulmonary tissues

Cell lines:

16HBE; HEK-293 T; A549; H460; H1299

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: ZEB1, EIF4A3, AGTPBP1, E-cadherin, N-cadherin
Associated microRNA: miR-205-5p
Biological function: Promotes cadmium-induced EMT during malignant transformation; overexpression enhances EMT marker changes, while knockdown reverses EMT marker changes.
Molecular mechanism: EIF4A3 binds the parental gene AGTPBP1 to promote circ_000999 expression; cytoplasmic circ_000999 acts as a ceRNA that binds miR-205-5p, inhibits miR-205-5p activity, upregulates ZEB1, and promotes EMT.
Biological pathway or process:

EMT (promotes); ceRNA regulation (promotes); fibrosis (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; RT-qPCR; RNA-seq; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; IF (Immunofluorescence); Western Blot; Clinical Sample Validation; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

circ_000999 may be a potential molecular target and diagnostic marker for LC; its expression is increased in human LC tissues and correlated with EMT indicators.

Description:

circ_000999 is up-regulated during cadmium-induced malignant transformation and in human LC tissues. EIF4A3 promotes circ_000999 expression via the parental gene AGTPBP1, and cytoplasmic circ_000999 promotes EMT by sponging miR-205-5p and increasing ZEB1 expression. The study suggests circ_000999 as a potential diagnostic marker and therapeutic target for LC related to EMT.

Confidence score:

0.8356

Other information
Title:

EIF4A3 modulated circ_000999 promotes epithelial-mesenchymal transition in cadmium-induced malignant transformation through the miR-205-5p/ZEB1 axis.

Journal: Environment international
Published: 2024
PubMed ID: 38621321
Study type:

combined biological and clinical study

Data availability: Data will be made available on request; Supplementary data to this article can be found online at https://doi. org/10.1016/j.envint.2024.108656.
Code availability: -