circRNA basic information
circBase ID: hsa_circ_0005178
Name: hsa_circ_CDC42BPB
Synonym: circCDC42BPB
Host Gene: CDC42BPB
Genomic location(hg19): chr14:103465901-103478525:-
Genomic location(hg38): chr14:102999564-103012188:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008383
MONDO name: rheumatoid arthritis
Disease details: Rheumatoid arthritis
Disease DO ID:
7148
Disease MeSH ID:
D001172
Disease NCIt ID:
C2884
Disease ICD11 ID:
576319925
Disease OMIM ID:
180300
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum; synovial tissues; peripheral blood mononuclear cells (PBMCs)

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: HIF-1alpha, CDC42BPB, RNA polymerase II (Pol II)
Associated microRNA: -
Biological function: circCDC42BPB promotes hypoxia-triggered RA-FLS proliferation, cell cycle progression, migration, and inflammatory response, and its overexpression partially abrogates the inhibitory effects of TMP.
Molecular mechanism: TMP inhibits HIF-1alpha-induced circCDC42BPB transcription under hypoxic conditions; HIF-1alpha binds the HREs in the CDC42BPB promoter region and increases transcription of the host gene, activating circCDC42BPB.
Biological pathway or process:

HIF-1 signaling (promotes); proliferation (promotes); cell cycle (promotes); migration (promotes); inflammation (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Luciferase Reporter Assay; ChIP / ChIP-seq; Transfection; CCK8; EdU Staining; Cell Cycle Assay; Wound Healing Assay; Transwell Assay; ELISA; Western Blot; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circCDC42BPB was highly expressed in serum of RA patients and showed diagnostic potential for RA with AUC 0.912.

Description:

hsa_circ_0005178/circCDC42BPB is up-regulated in RA patients and hypoxia-treated RA-FLSs and is reduced by TMP treatment. Functionally, circCDC42BPB promotes hypoxia-induced RA-FLS proliferation, cell cycle progression, migration, and inflammatory responses, counteracting TMP-mediated protection. Mechanistically, HIF-1alpha promotes circCDC42BPB transcription via the CDC42BPB promoter, forming a TMP/HIF-1alpha/circCDC42BPB regulatory axis with potential diagnostic and therapeutic relevance in RA.

Confidence score:

0.8256

Other information
Title:

Tetramethylpyrazine alleviates hypoxia-induced proliferation, migration, and inflammatory response of fibroblast-like synoviocytes via inhibiting the HIF-1alpha- circCDC42BPB pathway.

Journal: Advances in rheumatology (London, England)
Published: 2024
PubMed ID: 38449057
Study type:

combined biological and clinical study

Data availability: GSE226044; GSE189338; https://doi.org/10.1186/s42358-024-00355-1
Code availability: -