circRNA basic information
circBase ID: hsa_circ_0096041
Name: -
Synonym: circ_0096041
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumors; adjacent tissues; tumor xenografts; pancreatic tissues

Cell lines:

MNNG/HOS; U2OS; MG63; hFOB 1.19

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LIN28A, cMYC, Ras
Associated microRNA: miR-556-5p
Biological function: Promotes osteosarcoma cell proliferation, migration, metastasis, and malignant progression; high expression is associated with advanced stages and poor prognosis.
Molecular mechanism: circ_0096041 functions as a ceRNA by sponging miR-556-5p, thereby relieving miR-556-5p-mediated inhibition of LIN28A and increasing LIN28A, cMYC, and Ras expression.
Biological pathway or process:

proliferation (promotes); migration (promotes); metastasis (promotes); ceRNA regulation (other); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; MTT; Transwell Assay; Western Blot; IF (Immunofluorescence); In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry)

Clinical significance:

High circ_0096041 expression indicates shorter overall survival, poor prognosis, and association with advanced osteosarcoma stages.

Description:

circ_0096041 is up-regulated in osteosarcoma tissues and cells and acts as an oncogenic circRNA. It promotes proliferation, migration, and in vivo metastasis by sponging miR-556-5p and increasing LIN28A/cMYC/Ras signaling, and its high expression is associated with worse prognosis and advanced stage.

Confidence score:

0.7528

Other information
Title:

Circular RNA circ_0096041 promotes osteosarcoma cell proliferation and migration via sponging miR-556-5p and regulating LIN28A expression.

Journal: Cellular and molecular biology (Noisy-le-Grand, France)
Published: 2024
PubMed ID: 38430033
Study type:

combined biological and clinical study

Data availability: all data embedded in the manuscript
Code availability: -