circRNA basic information
circBase ID: hsa_circ_0002371
Name: hsa_circ_CCAR1
Synonym: circRNA1291
Host Gene: CCAR1
Genomic location(hg19): chr10:70545892-70546449:+
Genomic location(hg38): chr10:68786135-68786692:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0100481
MONDO name: active tuberculosis
Disease details: active tuberculosis
Disease DO ID:
-
Disease MeSH ID:
-
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PBMCs; peripheral blood samples

Cell lines:

THP-1; HEK293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: ATG16L1
Associated microRNA: hsa-miR-502-5p
Biological function: hsa_circ_0002371 promotes intracellular BCG/Mtb growth and survival in macrophages and inhibits autophagy in BCG-infected THP-1 cells.
Molecular mechanism: hsa_circ_0002371 interacts with and facilitates hsa-miR-502-5p expression, enhancing hsa-miR-502-5p-mediated suppression of ATG16L1, thereby inhibiting macrophage autophagy and promoting intracellular mycobacterial survival.
Biological pathway or process:

autophagy (inhibits); other pathway/process (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RT-qPCR; Microarray; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; IF (Immunofluorescence); Western Blot; ROC Analysis; Bioinformatics Analysis

Clinical significance:

hsa_circ_0002371 could serve as a potential diagnostic biomarker for active tuberculosis, with an AUC of 0.8063.

Description:

hsa_circ_0002371 is up-regulated in PBMCs from active tuberculosis patients and in H37Rv- or BCG-infected THP-1 macrophages. It promotes intracellular mycobacterial survival by inhibiting autophagy through the hsa_circ_0002371/hsa-miR-502-5p/ATG16L1 regulatory axis, and it has potential diagnostic biomarker value for ATB.

Confidence score:

0.8411

Other information
Title:

The hsa_circ_0002371/hsa-miR-502-5p/ATG16L1 axis modulates the survival of intracellular Mycobacterium tuberculosis and autophagy in macrophages.

Journal: Cellular signalling
Published: 2024
PubMed ID: 38944259
Study type:

combined biological and clinical study

Data availability: GSE261175; Supplementary Table S4; https://doi.org/10.1016/j.cellsig.2024.111271
Code availability: -