circRNA basic information
circBase ID: hsa_circ_0000096
Name: hsa_circ_HIAT1
Synonym: -
Host Gene: HIAT1
Genomic location(hg19): chr1:100515464-100535241:+
Genomic location(hg38): chr1:100049908-100069685:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; adjacent non-tumorous tissues; tumour tissues

Cell lines:

AGS; BGC-823; HGC-27; SGC-7901; MGC-803; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: cyclin D1, CDK6, MMP-2, MMP-9, Ki67, VEGF, E-cadherin
Associated microRNA: miR-200a, miR-224
Biological function: Promotes gastric cancer cell proliferation and migration; knockdown arrests cell cycle at G0/G1 and inhibits tumour growth in xenografts.
Molecular mechanism: Knockdown decreases cyclin D1/CDK6 and MMP-2/MMP-9 protein levels; proposed ceRNA interaction with miR-200a and miR-224.
Biological pathway or process:

cell cycle (promotes); proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Clinical Sample Validation; ROC Analysis; Transfection; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Wound Healing Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining

Clinical significance:

Potential diagnostic biomarker for gastric cancer (AUC=0.82); associated with invasion and TNM stage.

Description:

hsa_circ_0000096 is significantly down-regulated in gastric cancer tissues and cell lines and has diagnostic potential (ROC AUC 0.82). Functional knockdown experiments indicate it supports cell-cycle progression, proliferation, and migration, accompanied by reduced cyclin D1/CDK6 and MMP-2/MMP-9; a ceRNA relationship with miR-200a/miR-224 is suggested.

Confidence score:

0.722

Other information
Title:

Circular RNA 0000096 affects cell growth and migration in gastric cancer.

Journal: British journal of cancer
Published: 2017
PubMed ID: 28081541
Study type:

combined biological and clinical study

Data availability: Supplementary Information accompanies this paper on British Journal of Cancer website (http://www.nature.com/bjc)
Code availability: -