circRNA basic information
circBase ID: hsa_circ_0007113
Name: hsa_circ_HERC4
Synonym: -
Host Gene: HERC4
Genomic location(hg19): chr10:69785302-69804320:-
Genomic location(hg38): chr10:68025545-68044563:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
-
MONDO name: -
Disease details: cellular senescence
Disease DO ID:
-
Disease MeSH ID:
D016922
Disease NCIt ID:
C16394
Disease ICD11 ID:
-
Disease OMIM ID:
502000
Species: Human
Species details: Homo sapiens
Tissue specimen:

human embryonic lung fibroblasts; whole blood

Cell lines:

IMR-90

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: p53, p21
Associated microRNA: hsa-miR-515-5p / hsa_miR-1301-3p / hsa-miR-181c-5p / hsa-miR-22-5p / hsa-miR-141-5p
Biological function: Downregulation of hsa_circ_0007113 promotes cellular senescence; silencing hsa_circ_0007113 increases p53/p21 expression and SA-beta-gal staining, whereas hsa_circ_0007113 is decreased in aged individuals.
Molecular mechanism: ceRNA mechanism via miRNA binding; hsa_circ_0007113 binds hsa-miR-515-5p to regulate the p53/p21 signaling pathway.
Biological pathway or process:

p53 signaling (promotes); apoptosis (other); cell senescence (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RNA-seq; Microarray; RT-qPCR; Transfection; Western Blot; Flow Cytometry(Non-apoptosis/cycle); In Vivo Animal Model; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

The expression level of hsa_circ_0007113 was decreased in aged people, suggesting potential value as a biomarker for human aging/senescence.

Description:

hsa_circ_0007113 is downregulated in senescent IMR-90 cells and in older individuals. Functional inhibition of hsa_circ_0007113 promotes senescence, likely through a miR-515-5p/p53-p21-related ceRNA mechanism.

Confidence score:

0.6221

Other information
Title:

Endogenous hsa-circ_0007113 binds hsa-miR-515-5p to regulate senescence in human embryonic lung fibroblasts.

Journal: Advances in clinical and experimental medicine : official organ Wroclaw Medical University
Published: 2024
PubMed ID: 38141006
Study type:

combined biological and clinical study

Data availability: -
Code availability: -