circRNA basic information
circBase ID: hsa_circ_0001573
Name: -
Synonym: circRNA_0001573
Host Gene: -
Genomic location(hg19): chr6:7176887-7189555:+
Genomic location(hg38): chr6:7176654-7189322:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent normal tissues

Cell lines:

SW480; HCT116; HT29; HIEC

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: FZD3
Associated microRNA: miR-382-5p
Biological function: May serve as a potential diagnostic and progression-related biomarker for colorectal cancer; its upregulation is associated with CRC tissues and cell lines.
Molecular mechanism: Predicted circRNA-miRNA-mRNA regulatory network involving circRNA_0001573/miR-382-5p/FZD3, with possible involvement of the Wnt signaling pathway in CRC.
Biological pathway or process:

Wnt/beta-catenin (promotes); ceRNA regulation (other); other pathway/process (promotes)

Detected method:
Q
S
Validation methods:

RNase R Treatment; RT-qPCR; RNA-seq; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

May provide a potential diagnosis and predictive marker for diagnosis and progression of colorectal cancer.

Description:

hsa_circ_0001573 is upregulated in colorectal cancer tissues and CRC cell lines, with expression verified by qRT-PCR and resistance to RNase R digestion. The study proposes a circRNA_0001573/miR-382-5p/FZD3 regulatory axis as a potential mechanism related to CRC progression and suggests circRNA_0001573 as a potential diagnostic and progression biomarker.

Confidence score:

0.5135

Other information
Title:

The Role of circRNA-miRNA-mRNA Regulatory Network and its Potential Biomarker Function in Colorectal Cancer.

Journal: Protein and peptide letters
Published: 2023
PubMed ID: 38031269
Study type:

combined bioinformatics, biological and clinical study

Data availability: GSE77635; GSE142837; GSE138589; Supplementary material
Code availability: -