circRNA basic information
circBase ID: -
Name: hsa_circ_ZBTB46
Synonym: circZBTB46
Host Gene: ZBTB46
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018881
MONDO name: myelodysplastic syndrome
Disease details: myelodysplastic syndromes
Disease DO ID:
0050908
Disease MeSH ID:
-
Disease NCIt ID:
C3247
Disease ICD11 ID:
-
Disease OMIM ID:
614286
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow samples; bone marrow mononuclear cells

Cell lines:

SKM-1; THP-1; K562

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: Promotes leukemic cell proliferation and cell cycle progression, inhibits apoptosis, and is associated with disease progression in MDS and AML.
Molecular mechanism: Mechanism not fully defined; functional data indicate circZBTB46 enhances proliferation and cell cycle progression and reduces apoptosis in leukemic cells.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); cell cycle (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circZBTB46 expression is associated with MDS risk stratification, AML transformation, AML treatment response, and shorter survival in MDS and AML patients.

Description:

circZBTB46 is a human circRNA derived from ZBTB46 that is up-regulated in bone marrow samples from MDS and AML patients, with higher expression in higher-risk disease states. Clinically, high circZBTB46 expression is associated with adverse disease features, AML transformation, poorer treatment response in AML, and shorter survival. Functionally, circZBTB46 promotes leukemic cell proliferation and cell cycle progression while inhibiting apoptosis.

Confidence score:

0.8196

Other information
Title:

CircZBTB46 predicts poor prognosis and promotes disease progression of myelodysplastic syndromes and acute myeloid leukemia.

Journal: Clinical and experimental medicine
Published: 2023
PubMed ID: 37930606
Study type:

combined biological and clinical study

Data availability: GSE163386
Code availability: -