circRNA basic information
circBase ID: -
Name: hsa_circ_SLC8A1
Synonym: circRNA SLC8A1
Host Gene: SLC8A1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005027
MONDO name: epilepsy
Disease details: epilepsy
Disease DO ID:
1826
Disease MeSH ID:
D004827
Disease NCIt ID:
C3020
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum; hippocampal tissues; hippocampal neurons

Cell lines:

HN-h

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: FUS, ATF3 mRNA, ATF3, SLC7A11
Associated microRNA: -
Biological function: Triggers hippocampal neuronal ferroptosis and promotes epilepsy progression; knockdown of circSLC8A1 suppresses Mg2+-free-induced HN-h cell injury and ferroptosis.
Molecular mechanism: circSLC8A1 recruits the RNA-binding protein FUS to stabilize ATF3 mRNA expression, thereby promoting neuronal ferroptosis and contributing to epilepsy progression.
Biological pathway or process:

ferroptosis (promotes); mRNA stability (promotes); apoptosis (promotes); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; IF (Immunofluorescence); RNA Pull-Down; RIP (RNA Immunoprecipitation); Transfection; CCK8; Western Blot; IHC (Immunohistochemistry); TUNEL; In Vivo Animal Model; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Serum circSLC8A1 was reported as an accurate diagnostic biomarker for epilepsy and a potential therapeutic target.

Description:

circSLC8A1 is up-regulated in epilepsy patient serum, Mg2+-free-induced HN-h epilepsy cell models, and epilepsy rat hippocampal tissues. It promotes hippocampal neuronal ferroptosis by recruiting the RNA-binding protein FUS to stabilize ATF3 mRNA, and serum circSLC8A1 may serve as a diagnostic biomarker and therapeutic target for epilepsy.

Confidence score:

0.8655

Other information
Title:

Circular RNA SLC8A1 triggers hippocampal neuronal ferroptosis by regulating FUS-mediated ATF3 mRNA stability in epilepsy.

Journal: Experimental cell research
Published: 2024
PubMed ID: 37918704
Study type:

combined biological and clinical study

Data availability: Data will be made available on request.
Code availability: -