circRNA basic information
circBase ID: hsa_circ_0001445
Name: hsa_circ_SMARCA5
Synonym: -
Host Gene: SMARCA5
Genomic location(hg19): chr4:144464661-144465125:+
Genomic location(hg38): chr4:143543508-143543972:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005595
MONDO name: laryngeal squamous cell carcinoma
Disease details: Laryngeal squamous cell carcinoma
Disease DO ID:
2876
Disease MeSH ID:
-
Disease NCIt ID:
C4044
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LSCC tissues; matched adjacent non-tumor tissues; subcutaneous tumor tissues

Cell lines:

TU177; AMC-HN-8; NP69; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: EIF4A3, RGMA, AGO2
Associated microRNA: hsa-miR-432-5p
Biological function: inhibits proliferation, migration, invasion, metastasis and tumor growth; acts as a tumor suppressor gene in LSCC
Molecular mechanism: EIF4A3 binds to flanking sequences and reduces hsa_circ_0001445 expression; hsa_circ_0001445 acts as a ceRNA sponge for hsa-miR-432-5p to relieve repression of RGMA and up-regulate RGMA expression
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; Colony Formation Assay; Transwell Assay; Western Blot; Nuclear-Cytoplasmic Fractionation; In Vivo Animal Model; IHC (Immunohistochemistry); Survival Analysis; Bioinformatics Analysis

Clinical significance:

low expression is associated with advanced clinical stage, cervical lymph node metastasis and poor overall survival; may be used as a potential prognostic biomarker and therapeutic target for LSCC

Description:

hsa_circ_0001445 is down-regulated in LSCC tissues and cell lines and lower expression is associated with aggressive clinicopathological features and poor overall survival. Functionally, hsa_circ_0001445 suppresses LSCC cell proliferation, migration, invasion and xenograft tumor growth. Mechanistically, EIF4A3 reduces hsa_circ_0001445 expression, while hsa_circ_0001445 acts as a cytoplasmic ceRNA for hsa-miR-432-5p to relieve repression of RGMA.

Confidence score:

0.881

Other information
Title:

EIF4A3-regulated hsa_circ_0001445 can inhibit the progression of laryngeal squamous cell carcinoma via hsa-miR-432-5p-dependent up-regulation of RGMA expression.

Journal: Cell cycle (Georgetown, Tex.)
Published: 2023
PubMed ID: 37902305
Study type:

combined biological and clinical study

Data availability: GSE117001; raw data available on request from the corresponding author
Code availability: -