circRNA basic information
circBase ID: hsa_circ_0079557
Name: hsa_circ_RAPGEF5
Synonym: -
Host Gene: RAPGEF5
Genomic location(hg19): chr7:22306582-22357656:-
Genomic location(hg38): chr7:22266963-22318037:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC samples; adjacent normal tissues; CRC tissues

Cell lines:

SW480; SW620; KM12; NCM460; HEK 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CCND1 / Cyclin D1
Associated microRNA: miR-502-5p
Biological function: Promotes CRC cell proliferation, migration, colony-forming ability, cell cycle progression, and tumor growth in vivo.
Molecular mechanism: hsa_circ_0079557 acts as a molecular sponge for miR-502-5p and up-regulates CCND1 expression, thereby promoting CRC cell proliferation.
Biological pathway or process:

proliferation (promotes); migration (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Sanger Sequencing; FISH / smFISH; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Transwell Assay; Wound Healing Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

May provide a new target for diagnosing and treating CRC.

Description:

hsa_circ_0079557 is up-regulated in colorectal cancer tissues and cell lines. It promotes CRC cell proliferation, migration, colony formation, cell cycle progression, and xenograft tumor growth by sponging miR-502-5p and increasing CCND1 protein expression. The proposed hsa_circ_0079557/miR-502-5p/CCND1 pathway may represent a potential diagnostic or therapeutic target in CRC.

Confidence score:

0.8175

Other information
Title:

Hsa_circ_0079557 Promotes the Proliferation of Colorectal Cancer Cells Through the hsa_circ_0079557/miR-502-5p/CCND1 Axis.

Journal: Cancer genomics & proteomics
Published: 2023
PubMed ID: 37889059
Study type:

combined biological and clinical study

Data availability: GSE126094; GSE138589; GSE142837; GSE205643; GSE121895; TCGA Pan-Cancer (PANCAN); Table S1: https://share.weiyun.com/2Px3BHgq; Table S2: https://share.weiyun.com/iE2zJhkl; Table S3: https://share.weiyun.com/AM4xRgXT
Code availability: -