circRNA basic information
circBase ID: -
Name: hsa_circ_HIPK3
Synonym: EVs-circHIPK3
Host Gene: HIPK3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: extracellular vesicle
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008903
MONDO name: lung cancer
Disease details: lung cancer
Disease DO ID:
1324
Disease MeSH ID:
-
Disease NCIt ID:
C7377
Disease ICD11 ID:
-
Disease OMIM ID:
211980
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; whole blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TSPAN14
Associated microRNA: miR-637
Biological function: Serves as a promising and reliable diagnostic biomarker for lung cancer; may regulate downstream genes by regulating miR-637 and affect tumor migration.
Molecular mechanism: Predicted circHIPK3/miR-637 axis with a predicted downstream target gene TSPAN14; possible ceRNA-related regulation affecting cell migration and Notch signaling-related processes.
Biological pathway or process:

ceRNA regulation (other); migration (other); Notch (other); lipid metabolism (other)

Detected method:
Q
S
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; RNA-seq

Clinical significance:

EV-derived circHIPK3 can serve as a promising biomarker for lung cancer patient diagnosis, with ROC AUC 0.897 for distinguishing lung cancer from healthy controls.

Description:

EV-derived circHIPK3 is significantly up-regulated in plasma extracellular vesicles from lung cancer patients and shows diagnostic potential with an AUC of 0.897. The study predicts that circHIPK3 may interact with miR-637 and potentially influence downstream TSPAN14-related processes, including migration-associated pathways, although the downstream mRNA axis requires further experimental exploration.

Confidence score:

0.5047

Other information
Title:

Extracellular vesicle-derived circHIPK3: Novel diagnostic biomarker for lung cancer.

Journal: Advances in medical sciences
Published: 2023
PubMed ID: 37866205
Study type:

combined biological and clinical study

Data availability: exoRBase database (http://www.exoRBase.org/); The Cancer Genome Atlas (TCGA) database
Code availability: -