circRNA basic information
circBase ID: hsa_circ_0005273
Name: hsa_circ_PTK2
Synonym: CircPTK2
Host Gene: PTK2
Genomic location(hg19): chr8:141710989-141716304:-
Genomic location(hg38): chr8:140700890-140706205:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; adjacent normal tissues

Cell lines:

GES-1; AGS; MKN45; SNU-5

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: AATK, STK39, p38
Associated microRNA: miR-196a-3p
Biological function: Suppresses gastric cancer cell proliferation, migration, and invasion; inhibits tumorigenesis; triggers apoptosis
Molecular mechanism: Acts as a miRNA sponge binding miR-196a-3p to upregulate AATK, leading to inactivation of the STK39/p38 signaling pathway
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes); MAPK (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Transfection; Luciferase Reporter Assay; RNA Pull-Down; CCK8; Colony Formation Assay; Transwell Assay; Annexin V/PI Flow Cytometry; In Vivo Animal Model; IHC (Immunohistochemistry); Co-IP; Western Blot; Survival Analysis; Microarray

Clinical significance:

circPTK2 may serve as a novel therapeutic target for gastric cancer

Description:

circPTK2 (hsa_circ_0005273), derived from PTK2, is down-regulated in gastric cancer tissues and cell lines and functions as a tumor suppressor. It sponges miR-196a-3p to relieve repression of AATK, thereby inhibiting malignant behaviors (proliferation/migration/invasion), promoting apoptosis, and suppressing xenograft tumor growth, with downstream involvement of the STK39/p38 pathway.

Confidence score:

0.8861

Other information
Title:

CircPTK2 Suppresses the Progression of Gastric Cancer by Targeting the MiR-196a-3p/AATK Axis.

Journal: Frontiers in oncology
Published: 2021
PubMed ID: 34604044
Study type:

combined biological and clinical study

Data availability: GSE93541; GSE89143; GSE78092
Code availability: -