circRNA basic information
circBase ID: -
Name: hsa_circ_SEC61A1
Synonym: circSEC61A1
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent non-tumor tissues

Cell lines:

BEAS-2B; A549; H1299; Calu-3; H520; H1650

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PEX5, Ago2
Associated microRNA: miR-513a-5p
Biological function: Promotes NSCLC malignant phenotypes (proliferation, colony formation, migration, invasion), glycolysis, EMT, Wnt/beta-catenin pathway activation, tumor growth and lung metastasis.
Molecular mechanism: Acts as a miRNA sponge to competitively bind miR-513a-5p, thereby increasing PEX5 expression and promoting malignant behaviors and Wnt/beta-catenin activation.
Biological pathway or process:

Wnt/beta-catenin (promotes); glycolysis (promotes); EMT (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); H&E Staining; Survival Analysis

Clinical significance:

Upregulated in NSCLC patients and associated with poorer survival outcomes; potential biomarker/prognostic indicator.

Description:

circSEC61A1 is upregulated in NSCLC and functions as an oncogenic circRNA. It sponges miR-513a-5p to increase PEX5 expression, thereby promoting NSCLC cell malignant behaviors, glycolysis, EMT, and Wnt/beta-catenin pathway activation, and enhancing tumor growth and metastasis.

Confidence score:

0.8491

Other information
Title:

Circular RNA Sec61 subunit alpha isoform 1 by competitive absorption of microRNA-513a-5p mediates peroxisomal biogenesis factor 5 expression and promotes the malignant phenotype of non-small cell lung cancer.

Journal: The Kaohsiung journal of medical sciences
Published: 2023
PubMed ID: 36567627
Study type:

combined biological and clinical study

Data availability: -
Code availability: -