circRNA basic information
circBase ID: hsa_circ_0023409
Name: hsa_circ_RNF121
Synonym: -
Host Gene: RNF121
Genomic location(hg19): chr11:71693806-71701763:+
Genomic location(hg38): chr11:71982760-71990717:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent tissues

Cell lines:

GES-1; AGS; MKN45; HGC-27; SUN-1; MKN7

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: IRS4, PI3K, AKT
Associated microRNA: miR-542-3p
Biological function: promoted cell viability, proliferation, migration, and invasion and suppressed apoptosis in gastric cancer; promoted tumor growth and lung metastasis in vivo
Molecular mechanism: hsa_circ_0023409 acts as a sponge for miR-542-3p to upregulate IRS4 and activate the IRS4/PI3K/AKT pathway
Biological pathway or process:

PI3K/AKT (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
H
Validation methods:

RT-qPCR; RNase R Treatment; ISH (In Situ Hybridization); FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; Western Blot; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

high expression of hsa_circ_0023409 indicates poor prognosis in GC patients and is positively correlated with tumor size, histological grade, and TNM staging

Description:

In gastric cancer, hsa_circ_0023409 is up-regulated and mainly localized in the cytoplasm. It promotes proliferation, migration/invasion and inhibits apoptosis by sponging miR-542-3p to upregulate IRS4 and activate the PI3K/AKT pathway, and its high expression is associated with worse survival.

Confidence score:

0.8192

Other information
Title:

hsa_circ_0023409 Accelerates Gastric Cancer Cell Growth and Metastasis Through Regulating the IRS4/PI3K/AKT Pathway.

Journal: Cell transplantation
Published: 2021
PubMed ID: 33439739
Study type:

combined biological and clinical study

Data availability: All data generated or analyzed during this study are included in this published article.
Code availability: -