circRNA basic information
circBase ID: hsa_circ_0008259
Name: hsa_circ_LMO7
Synonym: circLMO7
Host Gene: LMO7
Genomic location(hg19): chr13:76287317-76335174:+
Genomic location(hg38): chr13:75713181-75761038:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: Gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues

Cell lines:

HGC-27; SGC-7901; MGC-803; BGC-823; MKN-45; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: WNT2, HNRNPL, GLS, beta-catenin, phosphorylated beta-catenin (p-beta-catenin), MMP9
Associated microRNA: miR-30a-3p
Biological function: promotes proliferation, migration, invasion, EMT, tumor growth and metastasis; promotes glutamine metabolism; inhibits ROS production
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-30a-3p to relieve inhibition of WNT2 and activate WNT2/beta-catenin signaling; HNRNPL binds flanking introns to promote circLMO7 cyclization; promotes glutaminolysis via GLS and related metabolites
Biological pathway or process:

Wnt/beta-catenin (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); glutaminolysis (promotes); oxidative phosphorylation (other); mitochondrial function (other); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Sanger Sequencing; FISH / smFISH; RNase R Treatment; divergent primers PCR; Actinomycin D / DRB Stability Assay; RNA Pull-Down; Luciferase Reporter Assay; Transfection; Colony Formation Assay; EdU Staining; Transwell Assay; Western Blot; IF (Immunofluorescence); RIP (RNA Immunoprecipitation); In Vivo Animal Model; H&E Staining; Bioinformatics Analysis; Clinical Sample Validation; IHC (Immunohistochemistry)

Clinical significance:

circLMO7 expression was closely related to the T grade and stage of GC; expected to become a new biomarker for GC

Description:

circLMO7 (hsa_circ_0008259), derived from LMO7, is upregulated in gastric cancer and mainly localizes to the cytoplasm. It promotes GC proliferation, migration/invasion, EMT and in vivo tumor growth/metastasis by sponging miR-30a-3p to derepress WNT2 and activate WNT2/beta-catenin signaling, and it enhances glutaminolysis (via GLS-related metabolic changes). HNRNPL facilitates circLMO7 biogenesis by binding to flanking introns.

Confidence score:

0.8794

Other information
Title:

Circular RNA circLMO7 acts as a microRNA-30a-3p sponge to promote gastric cancer progression via the WNT2/beta-catenin pathway.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2021
PubMed ID: 33397440
Study type:

combined biological and clinical study

Data availability: The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Code availability: -