circRNA basic information
circBase ID: -
Name: hsa_circ_CLIP1
Synonym: circCLIP1
Host Gene: CLIP1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: extracellular vesicle
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0003059
MONDO name: bile duct cancer
Disease details: bile duct cancer
Disease DO ID:
 4606
Disease MeSH ID:
 -
Disease NCIt ID:
 -
Disease ICD11 ID:
 -
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

human bile; bile EV samples
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: Potential marker used to distinguish malignant cancers from benign biliary diseases.
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
S
Validation methods:

RNA-seq; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis
Clinical significance:

Potential marker used to distinguish malignant cancers from benign biliary diseases.
Description:

circCLIP1 was detected by exLR sequencing and was enriched in bile EV samples from cancer patients. The study proposes it as a potential diagnostic marker, without reporting direct functional assays or a molecular mechanism for this circRNA.
Confidence score:

0.459
Other information
Title:

Extracellular vesicles long RNA profiling identifies abundant mRNA, circRNA and lncRNA in human bile as potential biomarkers for cancer diagnosis.

Journal: Carcinogenesis
Published: 2023
PubMed ID: 37696683
Study type:

combined clinical and bioinformatics study
Data availability: The data used to support the findings of this study are available from the corresponding author upon request.
Code availability: -