circRNA basic information
circBase ID: hsa_circ_0000073
Name: hsa_circ_OMA1
Synonym: hsa_circ_001069
Host Gene: OMA1
Genomic location(hg19): chr1:58992932-59002413:-
Genomic location(hg38): chr1:58527260-58536741:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tissues; paired paratumor tissues; OS tumors

Cell lines:

hFOB 1.19; MG63; 143B; U2OS; HOS; MG-63/MTX; U2OS/MTX; HEK293; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: NRAS, AGO2
Associated microRNA: miR-145-5p, miR-151-3p
Biological function: promotes proliferation, migration, invasion and methotrexate resistance in osteosarcoma cells
Molecular mechanism: Acts as a miRNA sponge for miR-145-5p and miR-151-3p to upregulate NRAS expression in OS cells.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); drug resistance (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; RT-qPCR; Clinical Sample Validation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Transwell Assay; Colony Formation Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Survival Analysis

Clinical significance:

High expression of hsa_circ_0000073 was associated with poor stage and poor survival of OS; higher in OS patients with an inadequate response to MTX than those with a good response.

Description:

hsa_circ_0000073 is upregulated in osteosarcoma and promotes malignant phenotypes (proliferation, migration, invasion) and methotrexate resistance. It functions mainly in the cytoplasm as a ceRNA that binds miR-145-5p and miR-151-3p, thereby relieving repression of NRAS.

Confidence score:

0.8595

Other information
Title:

Circular RNA hsa_circ_0000073 contributes to osteosarcoma cell proliferation, migration, invasion and methotrexate resistance by sponging miR-145-5p and miR-151-3p and upregulating NRAS.

Journal: Aging
Published: 2020
PubMed ID: 32706759
Study type:

combined biological and clinical study

Data availability: GSE96964
Code availability: -