circRNA basic information
circBase ID: hsa_circ_0006168
Name: hsa_circ_CNOT6L
Synonym: circCNOT6L
Host Gene: CNOT6L
Genomic location(hg19): chr4:78694234-78697546:-
Genomic location(hg38): chr4:77773080-77776392:-
Subcellular localization: cytoplasm; exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
1060198
MONDO name: ischemic stroke
Disease details: ischemic stroke
Disease DO ID:
-
Disease MeSH ID:
-
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; plasma exosomes; peripheral blood

Cell lines:

A172; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: SERPINE1
Associated microRNA: hsa-miR-99a-5p
Biological function: CircCNOT6L plays a protective role in ischemic stroke models by supporting astrocyte viability and proliferation and attenuating apoptotic signaling under OGD/R conditions.
Molecular mechanism: CircCNOT6L functions as a ceRNA/miRNA sponge that absorbs hsa-miR-99a-5p and regulates SERPINE1 expression, thereby modulating apoptotic signals in astrocytes after OGD/R.
Biological pathway or process:

apoptosis (inhibits); proliferation (promotes); ceRNA regulation (other); HIF-1 signaling (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Western Blot; Bioinformatics Analysis

Clinical significance:

circCNOT6L expression was lower in IS patients and negatively associated with NIHSS score, cerebral infarct volume, and several IS risk factors, suggesting a protective factor and potential severity-associated target.

Description:

CircCNOT6L/hsa_circ_0006168 is down-regulated in plasma and plasma exosomes from ischemic stroke patients and in OGD/R-exposed A172 astrocyte-like cells. The study supports a protective role in which circCNOT6L sponges hsa-miR-99a-5p to maintain SERPINE1 expression, thereby attenuating astrocyte apoptotic signaling and associating with lower IS severity.

Confidence score:

0.8537

Other information
Title:

Exosomal circCNOT6L Regulates Astrocyte Apoptotic Signals Induced by Hypoxia Exposure Through miR99a-5p/SERPINE1 and Alleviates Ischemic Stroke Injury.

Journal: Molecular neurobiology
Published: 2023
PubMed ID: 37531026
Study type:

combined biological and clinical study

Data availability: All data used in the current study available from the corresponding author on reasonable request.
Code availability: -