circRNA basic information
circBase ID: hsa_circ_0001013
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr14:20811305-20811534:-
Genomic location(hg38): chr14:20343146-20343375:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; paracancerous tissues; cancerous tissues

Cell lines:

MCF-10A; MDA-MB-231; SUM-159; MCF-7; SK-BR-3; MDA-MB-157

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CXCL10
Associated microRNA: miR-296-5p
Biological function: Hsa_circ_0000515 acts as an oncogenic circRNA in breast cancer; it promotes cell cycle progression, proliferation, invasion, angiogenesis, inflammatory response, and tumor growth, while its silencing suppresses these malignant phenotypes.
Molecular mechanism: Hsa_circ_0000515 functions through a ceRNA-like mechanism by binding miR-296-5p, impairing miR-296-5p-mediated repression of CXCL10 and thereby up-regulating CXCL10 expression to promote breast cancer progression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); invasion (promotes); angiogenesis (promotes); inflammation (promotes); cell cycle (promotes); apoptosis (inhibits); immune regulation (promotes)

Detected method:
Q
B
H
M
Validation methods:

Microarray; ISH (In Situ Hybridization); RT-qPCR; Northern Blot; RNase R Treatment; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; Transfection; EdU Staining; Transwell Assay; Cell Cycle Assay; Tube Formation Assay; ELISA; Western Blot; FISH / smFISH; RNA Pull-Down; Luciferase Reporter Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Cohort Study

Clinical significance:

Hsa_circ_0000515 was up-regulated in breast cancer tissues and associated with poor prognosis; patients with lower hsa_circ_0000515 expression exhibited longer overall survival.

Description:

Hsa_circ_0000515 is up-regulated in breast cancer tissues and cell lines, and high expression is associated with poor prognosis. Mechanistically, cytoplasmic hsa_circ_0000515 binds miR-296-5p and relieves miR-296-5p-mediated repression of CXCL10, promoting breast cancer cell proliferation, invasion, angiogenesis, inflammation, cell-cycle progression, and xenograft tumor growth.

Confidence score:

0.8537

Other information
Title:

Hsa_circ_0000515 is a novel circular RNA implicated in the development of breast cancer through its regulation of the microRNA-296-5p/CXCL10 axis.

Journal: The FEBS journal
Published: 2021
PubMed ID: 32446265
Study type:

combined biological and clinical study

Data availability: GSE101123; Gene Expression Omnibus (GEO) (https://www.ncbi.nlm.nih.gov/geo/)
Code availability: -