circRNA basic information
circBase ID: hsa_circ_0005230
Name: hsa_circ_DNM3OS
Synonym: -
Host Gene: DNM3OS
Genomic location(hg19): chr1:172109619-172113577:-
Genomic location(hg38): chr1:172140479-172144437:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0019087
MONDO name: cholangiocarcinoma
Disease details: cholangiocarcinoma
Disease DO ID:
4947
Disease MeSH ID:
D018281
Disease NCIt ID:
C4436
Disease ICD11 ID:
2110597275
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

CCA tissues; matched noncancerous specimens

Cell lines:

HuCCT1; KMBC; HCCC-9810; RBE; QBC939; HIBEC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-1238, miR-1299
Biological function: Promotes CCA cell proliferation and colony formation, enhances migration and invasion/metastasis, and inhibits apoptosis.
Molecular mechanism: Acts as a miRNA sponge (ceRNA) by directly binding miR-1238 and miR-1299; rescue assays indicate oncogenic effects are partly dependent on miR-1238/miR-1299 inhibition.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); H&E Staining; Clinical Sample Validation

Clinical significance:

circ_0005230 expression is related to larger tumor size, positive lymph node invasion, and advanced TNM stages in CCA patients.

Description:

circ_0005230 is up-regulated in cholangiocarcinoma tissues and cell lines and is associated with more aggressive clinicopathologic features. Functionally, it promotes proliferation, migration/invasion and in vivo tumor growth/metastasis while inhibiting apoptosis, at least partly by sponging miR-1238 and miR-1299.

Confidence score:

0.713

Other information
Title:

Elevation of circular RNA circ_0005230 facilitates cell growth and metastasis via sponging miR-1238 and miR-1299 in cholangiocarcinoma.

Journal: Aging
Published: 2019
PubMed ID: 30946694
Study type:

combined biological and clinical study

Data availability: -
Code availability: -