circRNA basic information
circBase ID: hsa_circ_0001789
Name: hsa_circ_RAB11FIP1
Synonym: hsa_-circ_0001789
Host Gene: RAB11FIP1
Genomic location(hg19): chr8:37734626-37735069:-
Genomic location(hg38): chr8:37877108-37877551:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004950
MONDO name: gastric carcinoma
Disease details: gastric carcinoma
Disease DO ID:
10538, 5517
Disease MeSH ID:
-
Disease NCIt ID:
C4911
Disease ICD11 ID:
1503707183
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; paracancerous tissues; plasma specimens; peripheral blood samples

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: hsa_circ_0001789 is down-regulated in GC tissues and plasma samples, is associated with aggressive clinicopathological features, and may serve as a diagnostic biomarker for gastric carcinoma.
Molecular mechanism: -
Biological pathway or process:

not specified

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; ROC Analysis

Clinical significance:

Down-regulated hsa_circ_0001789 was associated with tumor invasion, differentiation, lymphatic metastasis, TNM stage, and distant metastasis; ROC analysis indicated diagnostic value for GC with AUC 0.82.

Description:

This study identified hsa_circ_0001789 as a human circRNA derived from RAB11FIP1 and found it significantly down-regulated in gastric cancer tissues and plasma. Its reduced expression was associated with more aggressive clinicopathological characteristics, and ROC analysis supported its potential as a diagnostic biomarker for GC.

Confidence score:

0.5047

Other information
Title:

The role of circular RNA hsa_circ_0001789 as a diagnostic biomarker in gastric carcinoma.

Journal: Scandinavian journal of gastroenterology
Published: 2023
PubMed ID: 36111683
Study type:

clinical study

Data availability: -
Code availability: -