circRNA basic information
circBase ID: hsa_circ_0001306
Name: hsa_circ_RAD54L2
Synonym: -
Host Gene: RAD54L2
Genomic location(hg19): chr3:51575513-51586079:+
Genomic location(hg38): chr3:51541497-51552063:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC specimens; paired adjacent tissues; tumor tissues; normal liver tissues; nude mouse tumor specimens

Cell lines:

SK-HEP-1; Hep-3B; Hep-G2; HUH-7; THLE-2; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: FBXW7
Associated microRNA: miR-527
Biological function: inhibits HCC cell proliferation and invasion; tumor suppressor in HCC
Molecular mechanism: ceRNA mechanism: hsa_circ_0001306 sponges miR-527 to reduce its inhibitory effect on FBXW7, thereby affecting HCC progression
Biological pathway or process:

ceRNA regulation (other); proliferation (inhibits); invasion (inhibits); cell cycle (inhibits)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Cell Cycle Assay; In Vivo Animal Model; Western Blot; FISH / smFISH; Luciferase Reporter Assay; RNA Pull-Down; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Low expression level of hsa_circ_0001306 was associated with a larger tumor size of HCC; overall survival time between the high and low expression groups was not different

Description:

hsa_circ_0001306 is down-regulated in hepatocellular carcinoma and functions as a tumor suppressor. It mainly acts as a ceRNA that sponges miR-527 to relieve repression of FBXW7, thereby inhibiting HCC proliferation, invasion and cell-cycle progression; knockdown enhances xenograft tumor growth.

Confidence score:

0.8256

Other information
Title:

Circular RNA hsa_circ_0001306 Functions as a Competing Endogenous RNA to Regulate FBXW7 Expression by Sponging miR-527 in Hepatocellular Carcinoma.

Journal: Journal of Cancer
Published: 2021
PubMed ID: 34659544
Study type:

combined biological and clinical study

Data availability: -
Code availability: -