circRNA basic information
circBase ID: hsa_circ_0072309
Name: hsa_circ_LIFR
Synonym: circLIFR
Host Gene: LIFR
Genomic location(hg19): chr5:38523520-38530768:-
Genomic location(hg38): chr5:38523418-38530666:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; nearby non-tumor tissues; paired neighboring normal tissues; adjacent normal tissues; tumors

Cell lines:

A549; H1299; BEAS-2B; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: CELF2, PTEN, AKT
Associated microRNA: miR-429
Biological function: inhibits proliferation, migration and invasion; promotes apoptosis and cell-cycle arrest; suppresses tumor growth in vivo
Molecular mechanism: ceRNA mechanism; acts as a sponge of miR-429 to regulate CELF2 and PTEN/AKT-signaling pathways
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes); cell cycle (promotes); PI3K/AKT (inhibits); PTEN/AKT (inhibits); other pathway/process (other)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Colony Formation Assay; EdU Staining; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Microarray

Clinical significance:

circLIFR was closely connected with the clinical stage and tumor metastasis of NSCLC patients; circLIFR could play a potential diagnostics or prognostic biomarker for patients with NSCLC.

Description:

circLIFR is downregulated in NSCLC and acts as a tumor suppressor. It functions as a miR-429 sponge to upregulate CELF2 and activate PTEN-related suppression of AKT signaling, thereby inhibiting proliferation, migration, invasion, and tumor growth while promoting apoptosis and cell-cycle arrest.

Confidence score:

0.7769

Other information
Title:

CircLIFR Inhibits Non-small Cell Lung Cancer Progression by Acting as a miR-429 Sponge to Enhance CELF2 Expression.

Journal: Biochemical genetics
Published: 2023
PubMed ID: 36104590
Study type:

combined biological and clinical study

Data availability: The analyzed datasets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -