circRNA basic information
circBase ID: hsa_circ_0001947
Name: hsa_circ_AFF2
Synonym: -
Host Gene: AFF2
Genomic location(hg19): chrX:147743428-147744289:+
Genomic location(hg38): chrX:148661907-148662768:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018874
MONDO name: acute myeloid leukemia
Disease details: acute myeloid leukemia
Disease DO ID:
9119
Disease MeSH ID:
D015470
Disease NCIt ID:
C3171
Disease ICD11 ID:
-
Disease OMIM ID:
601626
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow (BM)

Cell lines:

THP-1; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: CREBRF
Associated microRNA: hsa-miR-329-5p
Biological function: suppresses AML cell proliferation and promotes apoptosis; inhibits AML tumor growth in vivo
Molecular mechanism: ceRNA mechanism; miRNA sponge targeting hsa-miR-329-5p and regulating CREBRF
Biological pathway or process:

proliferation (inhibits); apoptosis (promotes); drug resistance (other)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Sanger Sequencing; CCK8; Annexin V/PI Flow Cytometry; In Vivo Animal Model; Luciferase Reporter Assay; Transfection; Western Blot; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Microarray

Clinical significance:

may be a novel potential biomarker for the treatment of AML; may serve as a biomarker for the diagnosis and prognosis in AML

Description:

hsa_circ_0001947 is downregulated in AML and acts as a tumor suppressor. It inhibits AML cell proliferation and promotes apoptosis by sponging hsa-miR-329-5p and relieving repression of CREBRF, and it also shows diagnostic/prognostic potential in patient samples.

Confidence score:

0.8162

Other information
Title:

hsa_circ_0001947 suppresses acute myeloid leukemia progression via targeting hsa-miR-329-5p/CREBRF axis.

Journal: Epigenomics
Published: 2020
PubMed ID: 32657138
Study type:

combined biological and clinical study

Data availability: All data generated or analyzed during this study are included in this published article and its supplementary information file.
Code availability: -