circRNA basic information
circBase ID: hsa_circ_0007444
Name: hsa_circ_RHOBTB3
Synonym: -
Host Gene: RHOBTB3
Genomic location(hg19): chr5:95091099-95099324:+
Genomic location(hg38): chr5:95755395-95763620:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005184
MONDO name: pancreatic ductal adenocarcinoma
Disease details: pancreatic ductal adenocarcinoma
Disease DO ID:
3498, 3587
Disease MeSH ID:
D021441
Disease NCIt ID:
C9120
Disease ICD11 ID:
581089833
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent normal pancreas tissues

Cell lines:

BxPC-3; MiaPaca-2; CFPAC-1; PANC-1; HPNE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: NACC1, FUS, AGO2, Akt, mTOR
Associated microRNA: miR-600
Biological function: Promotes PDAC cell proliferation and tumor growth by enhancing autophagy.
Molecular mechanism: Acts as a miR-600 sponge to maintain NACC1 expression and promote autophagy via inhibiting Akt/mTOR signaling; biogenesis promoted by FUS binding to pre-RHOBTB3 mRNA.
Biological pathway or process:

autophagy (promotes); proliferation (promotes); PI3K/AKT/mTOR (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Bioinformatics Analysis; Survival Analysis

Clinical significance:

High circRHOBTB3 expression is associated with poor overall survival and is an independent prognostic factor in PDAC patients.

Description:

circRHOBTB3 is up-regulated in PDAC tissues and cell lines and promotes PDAC cell proliferation and tumor growth. It mainly localizes in the cytoplasm and acts as a ceRNA by sponging miR-600 to maintain NACC1 levels, thereby enhancing autophagy through inhibition of Akt/mTOR signaling; its biogenesis is promoted by the RBP FUS. High circRHOBTB3 expression predicts poor prognosis and is an independent risk factor in a 110-patient cohort.

Confidence score:

0.8816

Other information
Title:

FUS-induced circRHOBTB3 facilitates cell proliferation via miR-600/NACC1 mediated autophagy response in pancreatic ductal adenocarcinoma.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2021
PubMed ID: 34416910
Study type:

combined biological and clinical study

Data availability: -
Code availability: -