circRNA basic information
circBase ID: hsa_circ_0005941
Name: hsa_circ_FTO
Synonym: circ_0005941
Host Gene: FTO
Genomic location(hg19): chr16:53907697-53922863:+
Genomic location(hg38): chr16:53873785-53888951:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005266
MONDO name: diabetic retinopathy
Disease details: diabetic retinopathy
Disease DO ID:
8947
Disease MeSH ID:
D003930
Disease NCIt ID:
C34538
Disease ICD11 ID:
1006882070
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

mouse retinal tissues

Cell lines:

Human retinal vascular endothelial cells (RVECs)

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: TXNIP
Associated microRNA: miR-128-3p
Biological function: promotes viability and angiogenesis of retinal vascular endothelial cells and impairs blood-retinal barrier; circFTO silencing inhibits angiogenesis and promotes BRB recovery in vivo
Molecular mechanism: ceRNA mechanism: circFTO sponges miR-128-3p to upregulate TXNIP
Biological pathway or process:

angiogenesis (promotes); proliferation (promotes); blood-retinal barrier breakdown (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Tube Formation Assay; Western Blot; In Vivo Animal Model; H&E Staining

Clinical significance:

-

Description:

circFTO is up-regulated in high-glucose retinal vascular endothelial cells and in diabetic retinopathy mouse retinas. It promotes endothelial cell viability/angiogenesis and blood-retinal barrier breakdown by sponging miR-128-3p to increase TXNIP expression.

Confidence score:

0.7537

Other information
Title:

Circular Ribonucleic Acid circFTO Promotes Angiogenesis and Impairs Blood-Retinal Barrier Via Targeting the miR-128-3p/Thioredoxin Interacting Protein Axis in Diabetic Retinopathy.

Journal: Frontiers in molecular biosciences
Published: 2021
PubMed ID: 34422901
Study type:

combined biological and clinical study

Data availability: https://www.frontiersin.org/articles/10.3389/fmolb.2021.685466/full#supplementary-material
Code availability: -