circRNA basic information
circBase ID: hsa_circ_0025033
Name: hsa_circ_FOXM1
Synonym: -
Host Gene: FOXM1
Genomic location(hg19): chr12:2966846-2983691:-
Genomic location(hg38): chr12:2857680-2874525:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid carcinoma
Disease DO ID:
3969
Disease MeSH ID:
-
Disease NCIt ID:
C4035
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PTC tumor tissue; adjacent nontumor tissue; serum

Cell lines:

K1; IHH-4; BCPAP; TCP-1; Nthy-ori 3-1; TPC-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HMGB1, AGO2
Associated microRNA: miR-1179
Biological function: promotes PTC cell proliferation and tumor growth; facilitates cell-cycle progression
Molecular mechanism: acts as a miRNA sponge to sequester miR-1179, thereby upregulating HMGB1
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Western Blot; IHC (Immunohistochemistry); Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); In Vivo Animal Model

Clinical significance:

Elevated expression of circFOXM1 was positively correlated with tumor size, tumor stage, and poor lymph node metastasis.

Description:

circFOXM1 (hsa_circ_0025033), derived from FOXM1, is up-regulated in papillary thyroid carcinoma tissues and cell lines and is mainly localized in the cytoplasm. It promotes PTC proliferation and in vivo tumor growth by acting as a ceRNA sponge for miR-1179, thereby increasing HMGB1 expression.

Confidence score:

0.8397

Other information
Title:

Circular RNA circFOXM1 Plays a Role in Papillary Thyroid Carcinoma by Sponging miR-1179 and Regulating HMGB1 Expression.

Journal: Molecular therapy. Nucleic acids
Published: 2020
PubMed ID: 31951855
Study type:

combined biological and clinical study

Data availability: TCGA (http://cancergenome.nih.gov/); https://doi.org/10.1016/j.omtn.2019.12.014
Code availability: -