circRNA basic information
circBase ID: hsa_circ_0039960
Name: hsa_circ_PRMT7
Synonym: circ_0039960
Host Gene: PRMT7
Genomic location(hg19): chr16:68355328-68358735:+
Genomic location(hg38): chr16:68321425-68324832:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent normal tissues; tumor tissues

Cell lines:

MCF-10A; BT20; MCF-7; MDA-MB-231; SK-BR-3

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: PRMT7
Associated microRNA: miR-1178
Biological function: circ_0039960 promotes BC cell viability, cell cycle progression and Warburg effect, and inhibits apoptosis; silencing circ_0039960 inhibits cell growth and Warburg effect and induces cell cycle arrest and apoptosis.
Molecular mechanism: circ_0039960 acts as a sponge of miR-1178 to positively regulate PRMT7 expression, thereby regulating BC cell growth and Warburg effect.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); glycolysis (promotes); ceRNA regulation (promotes); other pathway/process (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Cell Cycle Assay; ELISA; Western Blot; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ_0039960 expression was associated with poor survival rate in BC patients and the findings may provide evidence for BC diagnostic and therapeutic targets.

Description:

circ_0039960 is up-regulated in breast cancer tissues and cell lines, and high expression is associated with poor survival. Functionally, circ_0039960 promotes BC cell growth, cell cycle progression and Warburg effect while suppressing apoptosis. Mechanistically, circ_0039960 sponges miR-1178 to positively regulate PRMT7 expression, forming a circ_0039960/miR-1178/PRMT7 axis.

Confidence score:

0.87

Other information
Title:

Circ_0039960 regulates growth and Warburg effect of breast cancer cells via modulating miR-1178/PRMT7 axis.

Journal: Molecular and cellular probes
Published: 2022
PubMed ID: 35597500
Study type:

combined biological and clinical study

Data availability: The data used to support the findings of this study are available from the corresponding author upon request.
Code availability: -