circRNA basic information
circBase ID: hsa_circ_0006404
Name: -
Synonym: circ_0006404
Host Gene: -
Genomic location(hg19): chr6:108984657-108986092:+
Genomic location(hg38): chr6:108663454-108664889:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC specimens; non-tumor corresponding tissues

Cell lines:

Hep3B; HepG2; SMMC-7721; Bel7402; HL-7702

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-624
Biological function: Facilitates HCC progression by increasing HCC cell growth, cell cycle progression, and migration.
Molecular mechanism: circ_0006404 acts as a sponge for miR-624 and suppresses miR-624 expression in HCC cells.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); cell cycle (promotes); migration (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; Cell Cycle Assay; Wound Healing Assay

Clinical significance:

circ_0006404 might act as one new biomarker for HCC.

Description:

circ_0006404 is up-regulated in HCC specimens and HCC cell lines. Functionally, circ_0006404 promotes HCC cell growth, cell cycle progression, and migration, at least partly by sponging and suppressing miR-624. The study suggests circ_0006404 may serve as a potential biomarker for HCC.

Confidence score:

0.6479

Other information
Title:

Circ_0006404 enhances hepatocellular carcinoma progression by regulating miR-624.

Journal: Environmental science and pollution research international
Published: 2022
PubMed ID: 35579835
Study type:

combined biological and clinical study

Data availability: -
Code availability: -