circRNA basic information
circBase ID: hsa_circ_0006089
Name: -
Synonym: circ_0006089
Host Gene: -
Genomic location(hg19): chr2:9490936-9499018:+
Genomic location(hg38): chr2:9350807-9358889:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; normal mucosal tissues

Cell lines:

HGC-27; BGC-823; AGS; MKN45; GES-1; HEK-293 T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: IGF1R, PI3K, AKT, mTOR, Ago2
Associated microRNA: miR-143-3p
Biological function: Promotes gastric cancer cell proliferation, growth, migration and invasion; acts as a tumor-promoter in gastric cancer.
Molecular mechanism: ceRNA mechanism: circ_0006089 sponges miR-143-3p, increases IGF1R expression, and activates the PI3K/Akt/mTOR signaling pathway.
Biological pathway or process:

PI3K/AKT/mTOR (promotes); proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; BrdU; Wound Healing Assay; Transwell Assay; Western Blot; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ_0006089 expression was associated with shorter overall survival, higher TNM stage, larger tumor size and positive lymph node metastasis in GC patients; circ_0006089 may serve as a promising therapeutic target for GC.

Description:

circ_0006089 is up-regulated in gastric cancer tissues and cell lines, and high expression is associated with poorer overall survival and more aggressive clinicopathological features. Functionally, circ_0006089 promotes GC cell proliferation, migration and invasion. Mechanistically, it acts as a ceRNA for miR-143-3p, thereby increasing IGF1R expression and activating the PI3K/Akt/mTOR pathway.

Confidence score:

0.7855

Other information
Title:

Circular RNA circ_0006089 regulates the IGF1R expression by targeting miR-143-3p to promote gastric cancer proliferation, migration and invasion.

Journal: Cell cycle (Georgetown, Tex.)
Published: 2022
PubMed ID: 35545863
Study type:

combined biological and clinical study

Data availability: GSE83521; TCGA-STAD; LinkedOmics; The data used to support the findings of this study are available from the corresponding author upon request.
Code availability: -