circRNA basic information
circBase ID: hsa_circ_0005397
Name: hsa_circ_RHOT1
Synonym: circ_0005397
Host Gene: RHOT1
Genomic location(hg19): chr17:30500849-30503232:+
Genomic location(hg38): chr17:32173830-32176213:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tumor tissues; adjacent normal tissues; mice tumor tissues

Cell lines:

Huh-7; SNU-387; THLE-2; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HEG1
Associated microRNA: miR-1283
Biological function: Promotes HCC cell viability, proliferation, migration, invasion, angiogenesis and tumor growth, and inhibits apoptosis.
Molecular mechanism: circ_0005397 acts as a miR-1283 sponge to regulate HEG1 expression through the circ_0005397/miR-1283/HEG1 axis.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); angiogenesis (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Western Blot; Transwell Assay; Tube Formation Assay; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

circ_0005397 expression is higher in stage III than stage I-II HCC and is enhanced in HCC patients with lymph node metastasis; it is suggested as a potential therapeutic target for HCC.

Description:

circ_0005397 is up-regulated in HCC tissues and cell lines and is associated with advanced stage and lymph node metastasis. It promotes HCC proliferation, migration, invasion, angiogenesis and xenograft tumor growth while suppressing apoptosis, mainly by sponging miR-1283 to up-regulate HEG1.

Confidence score:

0.8175

Other information
Title:

Circ_0005397 enhances hepatocellular carcinoma progression through miR-1283/HEG1.

Journal: Annals of hepatology
Published: 2022
PubMed ID: 35500803
Study type:

combined biological and clinical study

Data availability: -
Code availability: -