circRNA basic information
circBase ID: hsa_circ_0000788
Name: hsa_circ_MSI2
Synonym: -
Host Gene: MSI2
Genomic location(hg19): chr17:55372279-55372525:+
Genomic location(hg38): chr17:57294918-57295164:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
 10534
Disease MeSH ID:
 -
Disease NCIt ID:
 C9331
Disease ICD11 ID:
 1397617262
Disease OMIM ID:
 613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal gastric tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: Predicted ceRNA network involvement in GC (bioinformatics-based).
Biological pathway or process:

ceRNA regulation (other)
Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis
Clinical significance:

-
Description:

hsa_circ_0000788 (MSI2-derived) was identified as an up-regulated DEcircRNA in gastric cancer and included as a node in the predicted circRNA-miRNA-mRNA ceRNA network constructed from public microarray/TCGA data; no specific miRNA/mRNA axis was reported for this circRNA.
Confidence score:

0.1768
Other information
Title:

Identification of circRNA-miRNA-mRNA regulatory network in gastric cancer by analysis of microarray data.

Journal: Cancer cell international
Published: 2019
PubMed ID: 31346318
Study type:

bioinformatics study
Data availability: GSE78092; GSE83521; GSE93541; GSE100170; TCGA
Code availability: -