circRNA basic information
circBase ID: hsa_circ_0071106
Name: hsa_circ_ARHGAP10
Synonym: hsa_-circ_0071106
Host Gene: ARHGAP10
Genomic location(hg19): chr4:148778703-148803083:+
Genomic location(hg38): chr4:147857552-147881932:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissues; adjacent non-tumor tissues; adjacent non-tumorous mucosal tissue

Cell lines:

ECA109; ECA9706; HET-1A

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: Hsa_circ_0071106 showed a tumor suppressor-like role in ESCC; its knockdown promoted ESCC cell migration and invasion, transient knockdown promoted proliferation, and reduced apoptosis.
Molecular mechanism: The study did not define a detailed molecular mechanism; it showed that downregulated hsa_circ_0071106 promotes ESCC progression by regulating cell migration and invasion.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RT-qPCR; RNA-seq; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; EdU Staining; Transwell Assay; Annexin V/PI Flow Cytometry; ROC Analysis

Clinical significance:

Downregulated hsa_circ_0071106 was associated with histological differentiation grade and showed diagnostic value for ESCC and predictive value for histological differentiation.

Description:

hsa_circ_0071106 is a human circRNA derived from ARHGAP10 that is downregulated in ESCC tissues and cell lines. Low expression is associated with poorer histological differentiation, and functional knockdown experiments indicate a tumor-suppressive role, mainly restraining ESCC cell migration and invasion, with transient effects on proliferation and apoptosis. The circRNA may serve as a diagnostic biomarker and a predictor of ESCC differentiation degree.

Confidence score:

0.7969

Other information
Title:

Identification and function of circular RNA hsa_circ_0071106: A novel biomarker for differentiation degree of esophageal squamous cell carcinoma.

Journal: Pathology, research and practice
Published: 2022
PubMed ID: 35390631
Study type:

combined biological and clinical study

Data availability: -
Code availability: -