circRNA basic information
circBase ID: hsa_circ_0008367
Name: hsa_circ_IARS
Synonym: cIARS
Host Gene: IARS
Genomic location(hg19): chr9:95030455-95032265:-
Genomic location(hg38): chr9:92268173-92269983:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

HepG2; SMMC-7721; Huh7

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: ALKBH5, BCL-2, BECN1
Associated microRNA: -
Biological function: Promotes sorafenib/Erastin-induced ferroptosis and increases cellular sensitivity to sorafenib; positively regulates autophagy flux and ferritinophagy in HCC cells.
Molecular mechanism: cIARS physically binds the RNA-binding protein ALKBH5 and represses ALKBH5-mediated autophagy inhibition; through this cIARS-ALKBH5 interaction, cIARS promotes autophagy/ferritinophagy and thereby enhances ferroptosis during sorafenib treatment.
Biological pathway or process:

ferroptosis (promotes); autophagy (promotes); ferritinophagy (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; RNA EMSA; CCK8; Western Blot

Clinical significance:

-

Description:

In sorafenib-treated HCC cell lines, cIARS (hsa_circ_0008367, from IARS) is upregulated and promotes ferroptosis and drug cytotoxicity. Mechanistically, it binds the RBP ALKBH5 and counteracts ALKBH5-driven autophagy inhibition, thereby enhancing autophagic flux/ferritinophagy to support ferroptotic events.

Confidence score:

0.7742

Other information
Title:

Circular RNA cIARS regulates ferroptosis in HCC cells through interacting with RNA binding protein ALKBH5.

Journal: Cell death discovery
Published: 2020
PubMed ID: 32802409
Study type:

biological research

Data availability: -
Code availability: -