circRNA basic information
circBase ID: -
Name: hsa_circ_ZKSCAN1
Synonym: circZKSCAN1
Host Gene: ZKSCAN1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma
Disease DO ID:
4467
Disease MeSH ID:
-
Disease NCIt ID:
C4033
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ccRCC tissues; tumor tissues; adjacent normal tissues

Cell lines:

ACHN; CAKI-1; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PIM1, KLF2, ZKSCAN1 promoter
Associated microRNA: miR-1294
Biological function: Promotes ccRCC cell proliferation, migration, invasion, EMT and tumor growth, and reduces NK cell-mediated cytotoxicity toward RCC cells.
Molecular mechanism: KLF2 transcriptionally regulates circZKSCAN1 expression; circZKSCAN1 sponges miR-1294 to modulate PIM1 expression in ccRCC progression.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); immune regulation (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; ChIP / ChIP-seq; Luciferase Reporter Assay; Transfection; EdU Staining; Transwell Assay; Western Blot; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

Potential therapeutic target for ccRCC clinical intervention; survival and detailed clinicopathological analyses were not completed due to incomplete clinical information.

Description:

circZKSCAN1 is up-regulated in ccRCC tissues and cells and functions as an oncogenic circRNA. Its knockdown suppresses proliferation, migration, invasion, EMT and xenograft tumor growth, while enhancing NK cell-mediated cytotoxicity against RCC cells. Mechanistically, KLF2 transcriptionally regulates circZKSCAN1, which sponges miR-1294 to regulate PIM1 expression.

Confidence score:

0.8344

Other information
Title:

KLF2-induced circZKSCAN1 potentiates the tumorigenic properties of clear cell renal cell carcinoma by targeting the miR-1294/PIM1 axis.

Journal: Cell cycle (Georgetown, Tex.)
Published: 2022
PubMed ID: 35285410
Study type:

combined biological and clinical study

Data availability: -
Code availability: -