circRNA basic information
circBase ID: hsa_circ_0013958
Name: hsa_circ_ACP6
Synonym: circ_0013958
Host Gene: ACP6
Genomic location(hg19): chr1:147131074-147131890:-
Genomic location(hg38): chr1:147658959-147659775:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008170
MONDO name: ovarian cancer
Disease details: ovarian cancer
Disease DO ID:
2394
Disease MeSH ID:
D010051
Disease NCIt ID:
C7431
Disease ICD11 ID:
685124533
Disease OMIM ID:
167000
Species: Human
Species details: Homo sapiens
Tissue specimen:

OC tissues; neighboring non-cancerous tissues; xenograft tumor tissues

Cell lines:

HOSE; SKOV3; CAOV3; A2780; OVCAR-3

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PLXNB2, AGO2
Associated microRNA: miR-637
Biological function: promotes proliferation, migration and invasion; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: ceRNA sponge mechanism: circ_0013958 sponges miR-637 to increase PLXNB2 expression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

circ_0013958 could be used as a prognostic biomarker of OC patients (ROC AUC = 0.8806)

Description:

circ_0013958 is up-regulated in ovarian cancer tissues and cell lines and acts as a tumor promoter. It mainly localizes in the cytoplasm and functions as a ceRNA by sponging miR-637, thereby increasing PLXNB2 expression to promote proliferation/migration/invasion and inhibit apoptosis; its silencing suppresses xenograft tumor growth.

Confidence score:

0.7829

Other information
Title:

Circular RNA Circ_0013958 Functions as a Tumor Promoter in Ovarian Cancer by Regulating miR-637/PLXNB2 Axis.

Journal: Frontiers in genetics
Published: 2021
PubMed ID: 34367233
Study type:

combined biological and clinical study

Data availability: https://www.frontiersin.org/articles/10.3389/fgene.2021.644451/full#supplementary-material
Code availability: -