circRNA basic information
circBase ID: hsa_circ_0010235
Name: hsa_circ_ALDH4A1
Synonym: -
Host Gene: ALDH4A1
Genomic location(hg19): chr1:19201875-19216599:-
Genomic location(hg38): chr1:18875381-18890105:-
Subcellular localization: unclear
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tissues; adjacent nontumor lung tissues

Cell lines:

H1650; H1299; 16HBE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HOXA13
Associated microRNA: miR-1249-3p
Biological function: promotes cell proliferation, cycle progression, migration, invasion, EMT and tumor growth; inhibits miR-1249-3p
Molecular mechanism: ceRNA mechanism
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); migration (promotes); invasion (promotes); EMT (promotes); apoptosis (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Transfection; CCK8; EdU Staining; Cell Cycle Assay; Transwell Assay; Western Blot; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Survival Analysis; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Patients with low expression of circ_0010235 had a longer survival time than those with high circ_0010235 expression.

Description:

circ_0010235 is upregulated in LUAD and acts as an oncogenic circRNA. It promotes proliferation, migration, invasion, EMT, and tumor growth by sponging miR-1249-3p and relieving repression of HOXA13.

Confidence score:

0.8708

Other information
Title:

Identification of a Novel circ_0010235/miR-1249-3p/HOXA13 Axis in Lung Adenocarcinoma.

Journal: Biochemical genetics
Published: 2022
PubMed ID: 35076814
Study type:

combined biological and clinical study

Data availability: -
Code availability: -