circRNA basic information
circBase ID: hsa_circ_0004630
Name: hsa_circ_DHTKD1
Synonym: Circ_100549
Host Gene: DHTKD1
Genomic location(hg19): chr10:12123470-12136270:+
Genomic location(hg38): chr10:12081471-12094271:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

xenograft tumor tissue

Cell lines:

A549; PC-9; HCC827; H1975; BEAS-2B; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: BPTF, BIRC6, AGO2, DHTKD1
Associated microRNA: miR-95-5p
Biological function: Promotes LUAD cell proliferation and tumor growth, and inhibits LUAD cell apoptosis.
Molecular mechanism: ceRNA mechanism: circ_100549 sponges miR-95-5p to upregulate BPTF, and BPTF transcriptionally upregulates BIRC6.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); apoptosis (inhibits); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; ChIP / ChIP-seq; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

Potential therapeutic target for LUAD treatment.

Description:

circ_100549 is upregulated in LUAD cells and acts as an oncogenic circRNA. It promotes LUAD proliferation and xenograft tumor growth while inhibiting apoptosis through a ceRNA mechanism involving miR-95-5p, BPTF, and transcriptional upregulation of BIRC6.

Confidence score:

0.8412

Other information
Title:

Circ_100549 promotes tumor progression in lung adenocarcinoma through upregulation of BIRC6.

Journal: Histochemistry and cell biology
Published: 2024
PubMed ID: 38613646
Study type:

biological research

Data availability: The data that support the findings of this study are available from the corresponding author upon reasonable request; supplementary material available at https:// doi. org/ 10. 1007/ s00418-024-02275-z
Code availability: -