circRNA basic information
circBase ID: hsa_circ_0001451
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr4:153332454-153333681:-
Genomic location(hg38): chr4:152411302-152412529:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma
Disease DO ID:
4467
Disease MeSH ID:
-
Disease NCIt ID:
C4033
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ccRCC tissue; adjacent normal tissue / paraneoplastic tissues

Cell lines:

OS-RC-2; 786-O; OS-RC-1; ACHN; Caki1; HK-2; 293-T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: 48 genes
Associated microRNA: Hsa-miR-140-5p, Hsa-miR-197-3p, Hsa-miR-338-3p
Biological function: Inhibits proliferation and promotes apoptosis in ccRCC cells (acts as an anti-oncogene).
Molecular mechanism: Predicted ceRNA mechanism via sponging miRNAs (Hsa-miR-140-5p, Hsa-miR-197-3p, Hsa-miR-338-3p) and regulating downstream target genes; pathway enrichment suggests involvement in cancer-related pathways.
Biological pathway or process:

proliferation (inhibits); apoptosis (promotes); cell cycle (other); MAPK (other); TGF-beta/SMAD (other); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; MTT; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; Bioinformatics Analysis; Survival Analysis; ROC Analysis

Clinical significance:

Down-regulation is linked to aggressive clinicopathological characteristics; low level is negatively correlated with overall survival; ROC AUC indicates diagnostic value.

Description:

Hsa_circ_0001451 is down-regulated in ccRCC tissues and RCC cell lines and functions as a tumor-suppressive circRNA. Its knockdown increases ccRCC cell proliferation and reduces apoptosis. The study also predicts a ceRNA network involving Hsa-miR-140-5p, Hsa-miR-197-3p, and Hsa-miR-338-3p, and suggests potential diagnostic/prognostic value.

Confidence score:

0.6806

Other information
Title:

The effect of Hsa_circ_0001451 in clear cell renal cell carcinoma cells and its relationship with clinicopathological features.

Journal: Journal of Cancer
Published: 2018
PubMed ID: 30271486
Study type:

combined biological and clinical study

Data availability: -
Code availability: -