circRNA basic information
circBase ID: hsa_circ_0070934
Name: hsa_circ_LARP1B
Synonym: circ-LARP1B
Host Gene: LARP1B
Genomic location(hg19): chr4:128995614-129012667:+
Genomic location(hg38): chr4:128074459-128091512:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002529
MONDO name: skin squamous cell carcinoma
Disease details: cutaneous squamous cell carcinoma
Disease DO ID:
3151
Disease MeSH ID:
-
Disease NCIt ID:
C4819
Disease ICD11 ID:
1448983042
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

CSCC tissues; adjacent normal tissues; xenograft tumors

Cell lines:

A431; HSC-1; NHEK

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TPX2 microtubule nucleation factor, PI3K, AKT
Associated microRNA: miR-515-5p
Biological function: promotes cell viability, colony formation, migration, invasion, cell cycle progression, and glycolysis; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circ-LARP1B sponges miR-515-5p to up-regulate TPX2 and activate PI3K/AKT signaling
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); cell cycle (promotes); glycolysis (promotes); apoptosis (inhibits); PI3K/AKT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; MTT; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

High circ-LARP1B expression was closely associated with positive lymph node metastasis and poor histopathological grade.

Description:

circ-LARP1B is up-regulated in cutaneous squamous cell carcinoma and promotes malignant phenotypes (proliferation/colony formation, migration/invasion, cell-cycle progression, and glycolysis) while inhibiting apoptosis. Mechanistically, it acts as a ceRNA by sponging miR-515-5p to increase TPX2 expression and activate PI3K/AKT signaling, and its knockdown suppresses xenograft tumor growth.

Confidence score:

0.8039

Other information
Title:

Circular RNA circ-LARP1B contributes to cutaneous squamous cell carcinoma progression by targeting microRNA-515-5p/TPX2 microtubule nucleation factor axis.

Journal: Bioengineered
Published: 2022
PubMed ID: 34982022
Study type:

combined biological and clinical study

Data availability: Supplemental data for this article can be accessed here
Code availability: -