circRNA basic information
circBase ID: -
Name: hsa_circ_ITCH
Synonym: circITCH / Circular RNA ITCH (circITCH)
Host Gene: ITCH
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005105
MONDO name: melanoma
Disease details: melanoma
Disease DO ID:
1909
Disease MeSH ID:
D008545
Disease NCIt ID:
C3224
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

melanoma tissues; adjacent normal tissues

Cell lines:

WM-115; A-375

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: TFCP2, Ago2
Associated microRNA: miR-660
Biological function: suppresses melanoma cell proliferation and metastasis
Molecular mechanism: circITCH acts as a ceRNA by sponging miR-660, relieving repression of TFCP2; recruitment to Ago2-related RISC supports miRNA-mediated regulation
Biological pathway or process:

proliferation (inhibits); metastasis (inhibits); ceRNA regulation (other); migration (inhibits); invasion (inhibits)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; In Vivo Animal Model; H&E Staining; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Bioinformatics Analysis

Clinical significance:

circITCH can be a diagnostic biomarker as well as a target for treating melanoma

Description:

circITCH is down-regulated in melanoma tissues and acts as a tumor suppressor by inhibiting melanoma cell proliferation and metastasis. Mechanistically, circITCH predominantly localizes in the cytoplasm and functions as a ceRNA to sponge miR-660, thereby upregulating TFCP2 via an Ago2/RISC-associated interaction.

Confidence score:

0.7295

Other information
Title:

circITCH suppresses cell proliferation and metastasis through miR-660/TFCP2 pathway in melanoma.

Journal: Cancer medicine
Published: 2022
PubMed ID: 35274492
Study type:

combined biological and clinical study

Data availability: Data will be made available if needed.
Code availability: -