circRNA basic information
circBase ID: hsa_circ_0004771
Name: hsa_circ_NRIP1
Synonym: circNRIP1
Host Gene: NRIP1
Genomic location(hg19): chr21:16386664-16415895:-
Genomic location(hg38): chr21:15014343-15043574:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric tissue; peripheral blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: QKI
Associated microRNA: -
Biological function: -
Molecular mechanism: Predicted circRNA-miRNA-mRNA and circRNA-RBP regulatory networks in gastric cancer.
Biological pathway or process:

ceRNA regulation (other); apoptosis (other); p53 signaling (other); cell cycle (other); PI3K/AKT/mTOR (other); MAPK (other); HIF-1 signaling (other); TGF-beta/SMAD (other); Hippo/YAP (other); Wnt/beta-catenin (other); VEGF/VEGFR (other); EGFR (other); immune regulation (other)

Detected method:
Q
S
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; RNA-seq

Clinical significance:

Potential diagnostic biomarker in tissue and peripheral blood (ROC AUC > 0.70).

Description:

hsa_circ_0004771 (circNRIP1) is up-regulated in gastric cancer in both gastric tissue and peripheral blood by RT-qPCR and is proposed as a minimally invasive diagnostic biomarker candidate. The paper notes QKI as an RBP related to its biogenesis and analyzes predicted interaction networks and pathway enrichment relevant to gastric carcinogenesis.

Confidence score:

0.5047

Other information
Title:

CircRNAs as Potential Blood Biomarkers and Key Elements in Regulatory Networks in Gastric Cancer.

Journal: International journal of molecular sciences
Published: 2022
PubMed ID: 35054834
Study type:

combined biological and clinical study

Data availability: The data presented in this study are available on request from the corresponding authors.
Code availability: -