circRNA basic information
circBase ID: hsa_circ_0003266
Name: hsa_circ_LRIG1
Synonym: -
Host Gene: LRIG1
Genomic location(hg19): chr3:66501982-66512933:-
Genomic location(hg38): chr3:66451558-66462509:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002492
MONDO name: acute kidney injury
Disease details: acute kidney injury
Disease DO ID:
3021
Disease MeSH ID:
D058186
Disease NCIt ID:
C26808
Disease ICD11 ID:
476391827
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

whole blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: LRIG1
Associated microRNA: miR-126-5p
Biological function: Acts as a circulating biomarker of AKI and predicts 28-day mortality; potentially functions as a miRNA sponge.
Molecular mechanism: Predicted ceRNA/miRNA sponge interaction with miR-126-5p based on bioinformatic target prediction; downstream effects not experimentally proven in this study.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Agarose Gel Electrophoresis; Clinical Sample Validation; Cohort Study; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Baseline circulating ciRs-126 was increased in nonsurvivors and was an independent predictor of 28-day survival; ROC AUC 0.92.

Description:

In critically ill AKI patients at initiation of RRT, circulating ciRs-126 (hsa_circ_0003266) is significantly increased and is an independent predictor of 28-day mortality. It is predicted to sponge miR-126-5p based on bioinformatic target prediction, but direct binding was not definitively proven.

Confidence score:

0.7278

Other information
Title:

The Circular RNA ciRs-126 Predicts Survival in Critically Ill Patients With Acute Kidney Injury.

Journal: Kidney international reports
Published: 2018
PubMed ID: 30197981
Study type:

combined biological and clinical study

Data availability: Supplementary Table S1; Supplementary Table S2; Table S3; Figure S1
Code availability: -