circRNA basic information
circBase ID: -
Name: hsa_circ_RUNX1
Synonym: circRUNX1
Host Gene: RUNX1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent non-tumour tissues; tumour tissues

Cell lines:

NCM460; SW480; SW620

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SLC38A1, Ago2
Associated microRNA: miR-485-5p
Biological function: CircRUNX1 promotes CRC cell colony formation, migration, invasion, tumour growth and glutamine metabolism, and inhibits apoptosis.
Molecular mechanism: CircRUNX1 acts as a miR-485-5p sponge to elevate SLC38A1 expression, thereby promoting CRC progression and glutamine metabolism.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); apoptosis (inhibits); glutaminolysis (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

circRUNX1 level was related to lymph node metastasis, TNM stages and tumour stages, and may be a potential biomarker for CRC prognosis.

Description:

circRUNX1 is up-regulated in colorectal cancer tissues and cell lines and functions as an oncogenic circRNA. It promotes CRC cell colony formation, migration, invasion, tumour growth and glutamine metabolism while suppressing apoptosis through the circRUNX1/miR-485-5p/SLC38A1 axis. Its expression is associated with lymph node metastasis and TNM stage, suggesting potential prognostic biomarker value.

Confidence score:

0.7595

Other information
Title:

CircRUNX1 functions as an oncogene in colorectal cancer by regulating circRUNX1/miR-485-5p/SLC38A1 axis.

Journal: European journal of clinical investigation
Published: 2021
PubMed ID: 33769559
Study type:

combined biological and clinical study

Data availability: The analysed data sets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -