circRNA basic information
circBase ID: hsa_circ_0074027
Name: hsa_circ_PITX1
Synonym: circPITX1
Host Gene: PITX1
Genomic location(hg19): chr5:134363423-134369964:-
Genomic location(hg38): chr5:135027733-135034274:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018177
MONDO name: glioblastoma
Disease details: glioblastoma
Disease DO ID:
3068
Disease MeSH ID:
D005909
Disease NCIt ID:
C3058
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

GBM tissues; control brain tissues; tumor tissues

Cell lines:

NHA; SHG-44; U251; T98; LN229; A172; human umbilical vein endothelial cells

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: KPNB1
Associated microRNA: miR-584-5p
Biological function: Promotes proliferation, angiogenesis, migration, invasion, cell cycle progression, and tumor growth in glioblastoma cells.
Molecular mechanism: circPITX1 functions as a competing endogenous RNA that sponges miR-584-5p to regulate KPNB1 expression in GBM.
Biological pathway or process:

proliferation (promotes); angiogenesis (promotes); migration (promotes); invasion (promotes); cell cycle (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Microarray; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Luciferase Reporter Assay; RNA Pull-Down; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Transwell Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

circPITX1/miR-584-5p/KPNB1 could serve as diagnostic markers for GBM patients.

Description:

circPITX1 is up-regulated in glioblastoma tissues and cells and acts as an oncogenic circRNA. It promotes GBM cell proliferation, angiogenesis, migration, invasion, cell cycle progression, and xenograft tumor growth by sponging miR-584-5p and regulating KPNB1 expression. The study suggests the circPITX1/miR-584-5p/KPNB1 axis may have diagnostic relevance for GBM patients.

Confidence score:

0.8511

Other information
Title:

CircPITX1 Regulates Proliferation, Angiogenesis, Migration, Invasion, and Cell Cycle of Human Glioblastoma Cells by Targeting miR-584-5p/KPNB1 Axis.

Journal: Journal of molecular neuroscience : MN
Published: 2021
PubMed ID: 33763840
Study type:

combined biological and clinical study

Data availability: GSE109569; TCGA COAD database
Code availability: -