circRNA basic information
circBase ID: -
Name: hsa_circ_PUM1
Synonym: circular RNA PUM1
Host Gene: PUM1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma
Disease DO ID:
4467
Disease MeSH ID:
-
Disease NCIt ID:
C4033
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ccRCC tissues; adjacent normal kidney tissues

Cell lines:

HK-2; Caki-2; 786-O

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: FABP7, MEK/ERK pathway
Associated microRNA: miR-340-5p
Biological function: Promotes ccRCC cell DNA synthesis, proliferation, migration, and invasion, and inhibits apoptosis.
Molecular mechanism: CircPUM1 acts through a ceRNA mechanism by competitively binding miR-340-5p, upregulating FABP7, and activating the MEK/ERK pathway.
Biological pathway or process:

ERK (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Wound Healing Assay; Transwell Assay; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; Luciferase Reporter Assay; Western Blot; Bioinformatics Analysis

Clinical significance:

Potential circRNA-based therapeutic target for ccRCC.

Description:

CircPUM1 is up-regulated in ccRCC tissues and cell lines. It promotes malignant progression by sponging miR-340-5p, thereby increasing FABP7 expression and activating the MEK/ERK pathway; CircPUM1 knockdown suppresses proliferation, migration and invasion and promotes apoptosis.

Confidence score:

0.73

Other information
Title:

Silencing of circular RNA PUM1 inhibits clear cell renal cell carcinoma progression through the miR-340-5p/FABP7 axis.

Journal: Journal of receptor and signal transduction research
Published: 2022
PubMed ID: 33472512
Study type:

combined biological and clinical study

Data availability: All the data generated or analyzed during this study are included in this published article.
Code availability: -