circRNA basic information
circBase ID: hsa_circ_0001320
Name: hsa_circ_FOXP1
Synonym: -
Host Gene: FOXP1
Genomic location(hg19): chr3:71064699-71102924:-
Genomic location(hg38): chr3:71015548-71053773:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005348
MONDO name: keloid
Disease details: keloid
Disease DO ID:
-
Disease MeSH ID:
D007627
Disease NCIt ID:
C3145
Disease ICD11 ID:
2057714006
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

keloids; normal skin tissues; uninvolved skin near the keloids

Cell lines:

HEK293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: SMAD4
Associated microRNA: miR-574-5p
Biological function: hsa_circ_0001320 was upregulated in keloid tissues and may be related to keloid formation and development; it may regulate SMAD4 through miR-574-5p sponge adsorption and affect keloid occurrence and development through the TGF-beta pathway.
Molecular mechanism: ceRNA mechanism involving hsa_circ_0001320 binding miR-574-5p and possibly regulating SMAD4 through the TGF-beta pathway
Biological pathway or process:

ceRNA regulation (other); Wnt/beta-catenin (other); TGF-beta/SMAD (other)

Detected method:
Q
S
Validation methods:

RNase R Treatment; RT-qPCR; circRNA-seq; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; Bioinformatics Analysis

Clinical significance:

Potential novel therapeutic target or diagnostic biomarker for keloid patients

Description:

hsa_circ_0001320 is significantly upregulated in keloid tissue and its expression was validated by QPCR in an expanded clinical cohort. The study confirmed direct interaction between hsa_circ_0001320 and miR-574-5p by dual-luciferase reporter assay, and proposed that it may influence keloid development through a miR-574-5p/SMAD4/TGF-beta-related mechanism.

Confidence score:

0.6902

Other information
Title:

Identification of differentially expressed circular RNAs in keloid and normal skin tissue by high-throughput sequencing.

Journal: Dermatologic therapy
Published: 2021
PubMed ID: 33405341
Study type:

combined biological and clinical study

Data availability: GSE151464
Code availability: -